BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB033C01LP1|AL429700
(854 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1657 224 2e-58
3x_Contig802 107 3e-23
>3x_Contig1657
Length = 14558
Score = 224 bits (113), Expect = 2e-58
Identities = 120/121 (99%), Gaps = 1/121 (0%)
Strand = Plus / Plus
Query: 735 tataccttgcatctcgttaatgttacaagaatttgttagtgtaa-cattaactaatggaa 793
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1 tataccttgcatctcgttaatgttacaagaatttgttagtgtaaacattaactaatggaa 60
Query: 794 gagtgaggtggtgggtctggcacaccttttgatatcgttcttttggttctaatgatgaga 853
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gagtgaggtggtgggtctggcacaccttttgatatcgttcttttggttctaatgatgaga 120
Query: 854 g 854
|
Sbjct: 121 g 121
>3x_Contig802
Length = 2309
Score = 107 bits (54), Expect = 3e-23
Identities = 54/54 (100%)
Strand = Plus / Minus
Query: 3 acggcagcttgcacaaacaacatgacgaaattcatgttgaaccctttcaaattg 56
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 67 acggcagcttgcacaaacaacatgacgaaattcatgttgaaccctttcaaattg 14
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8153
Number of Sequences: 1807
Number of extensions: 8153
Number of successful extensions: 52
Number of sequences better than 1.0e-20: 2
length of query: 854
length of database: 10,358,551
effective HSP length: 16
effective length of query: 838
effective length of database: 10,329,639
effective search space: 8656237482
effective search space used: 8656237482
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)